NBE-E453001 - Special Course in Human Neuroscience V D: Imaging Brain Microstructure and Connectivity with Diffusion MRI, Lectures, 23.4.2024-7.6.2024
This course space end date is set to 07.06.2024 Search Courses: NBE-E453001
Self-study before session 3 + submit learning log about session 2 (DL 13.5. 23:59)
Completion requirements
Please also submit a learning log (only write 10-20 lines) about session 2 by answering the question: "What to consider (in preprocessing and acquisition) to ensure the best possible data to start analyzing in the following parts of the course?"
Due: Tuesday, 14 May 2024, 12:00 AM
Before Session 3:
Get familiar with the traditionally most used method for the analysis of diffusion MRI data, diffusion tensor imaging (DTI):
https://www.youtube.com/watch?v=e_xFMpjeZuU
Read pages 1532-1543 (until the subtitle: Beyond the tensor model) from Tournier, Mori, and Leemans (2011): https://onlinelibrary-wiley-com.libproxy.aalto.fi/doi/pdfdirect/10.1002/mrm.22924
Chapter 31 Diffusion and diffusion tensor imaging fundamentals by Peter Basser: https://citeseerx.ist.psu.edu/document?repid=rep1&type=pdf&doi=5fce53d8b00072e4595329a2119e737c2227cbd8
Make sure that you have MRtrix3 working and that you have started to work on the project (at least the plan should be ready). If you need help with MRtrix3, contact timo.roine@aalto.fi.Please also submit a learning log (only write 10-20 lines) about session 2 by answering the question: "What to consider (in preprocessing and acquisition) to ensure the best possible data to start analyzing in the following parts of the course?"